STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05380.1Protein of unknown function DUF129; PFAM: F420-0:Gamma-glutamyl ligase; InterPro IPR002847; KEGG: ter:Tery_4381 hypothetical protein; PFAM: F420-0 gamma-glutamyl ligase-related; SPTR: Putative uncharacterized protein. (393 aa)    
Predicted Functional Partners:
AFZ08777.1
Hypothetical protein; PFAM: Localisation of periplasmic protein complexes; KEGG: ter:Tery_1117 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.685
AFZ04700.1
PFAM: PRC-barrel domain; InterPro IPR007903; KEGG: ter:Tery_0532 hypothetical protein; PFAM: PRC-barrel; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ07654.1
KEGG: ter:Tery_4353 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.609
AFZ05383.1
PFAM: Protein of unknown function (DUF3727); Protein of unknown function (DUF1292); InterPro IPR009711; KEGG: ter:Tery_4377 hypothetical protein; PFAM: Uncharacterised protein family UPF0473; SPTR: Putative uncharacterized protein.
 
     0.594
AFZ07172.1
CAB/ELIP/HLIP family protein; PFAM: Chlorophyll A-B binding protein; KEGG: ter:Tery_1966 CAB/ELIP/HLIP family protein; SPTR: Possible high light inducible polypeptide HliC.
  
     0.510
AFZ10144.1
PFAM: GAF domain; InterPro IPR003018; KEGG: npu:Npun_R0911 putative GAF sensor protein; PFAM: GAF; SMART: GAF; SPTR: Putative uncharacterized protein.
  
     0.506
AFZ08991.1
PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3751 proline hydroxylase; InterPro IPR005123:IPR006620; KEGG: ter:Tery_1127 prolyl 4-hydroxylase, alpha subunit; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: Prolyl 4-hydroxylase, alpha subunit.
  
     0.498
AFZ05381.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: ter:Tery_4380 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein.
       0.490
AFZ07492.1
PFAM: Protein of unknown function (DUF3155); KEGG: ter:Tery_3913 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.472
AFZ09107.1
TIGRFAM: photosystem II cytochrome PsbV2; InterPro IPR017490; KEGG: ter:Tery_2687 cytochrome c-550; SPTR: Cytochrome c-550-like protein; TIGRFAM: Photosystem II PsbV2, cytochrome.
  
     0.469
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.