STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05398.1KEGG: cyj:Cyan7822_3010 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (234 aa)    
Predicted Functional Partners:
AFZ05397.1
Hypothetical protein; PFAM: TM2 domain; InterPro IPR007829; KEGG: mar:MAE_27560 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.939
AFZ06488.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649; KEGG: ter:Tery_1741 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.702
AFZ09916.1
Hypothetical protein; PFAM: NB-ARC domain; InterPro IPR011579; KEGG: mar:MAE_34750 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.655
AFZ06500.1
KEGG: npu:Npun_F0692 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.646
AFZ06891.1
PFAM: Bacterial type II secretion system protein F domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: ter:Tery_1745 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein.
  
  
 0.631
AFZ09112.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.602
AFZ08168.1
KEGG: cyn:Cyan7425_4103 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.595
AFZ05998.1
PFAM: Protein of unknown function (DUF3352); KEGG: ava:Ava_3131 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.594
AFZ06168.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: cyj:Cyan7822_6139 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein.
  
     0.582
AFZ07089.1
KEGG: mar:MAE_38360 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.574
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.