STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05409.1PFAM: Protein of unknown function (DUF1611); COGs: COG3367 conserved hypothetical protein; InterPro IPR011669; KEGG: cyc:PCC7424_3589 protein of unknown function DUF1611; PFAM: Protein of unknown function DUF1611; SPTR: Putative uncharacterized protein. (349 aa)    
Predicted Functional Partners:
AFZ05407.1
PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342:IPR013341; KEGG: npu:Npun_R6604 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Muconate cycloisomerase.
     0.942
AFZ05410.1
Restriction endonuclease, type I, EcoRI, R subunit/Type III; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: cyc:PCC7424_2176 protein of unknown function DUF450; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein.
       0.631
AFZ05411.1
PFAM: Cupin domain; InterPro IPR013096; KEGG: bpb:bpr_III178 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein.
       0.622
AFZ05412.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: ter:Tery_3873 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase.
       0.622
AFZ05408.1
PFAM: Protein of unknown function (DUF820); Borrelia P83/100 protein; COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyj:Cyan7822_3898 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
       0.551
AFZ07516.1
KEGG: ava:Ava_3482 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.419
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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