STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05436.1Thermitase; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Bacterial pre-peptidase C-terminal domain; Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR001343:IPR007280:IPR000209; KEGG: ter:Tery_0488 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Peptidase, C-terminal, archaeal/bacterial; Haemolysin-type calcium-binding repeat; PRIAM: Thermitase; SPTR: Subtilase family protein. (681 aa)    
Predicted Functional Partners:
AFZ08773.1
PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR001434:IPR001343; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: Domain of unknown function DUF11; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Domain of unknown function DUF11.
 
 
 0.616
AFZ04945.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Putative peptidoglycan binding domain; InterPro IPR000209:IPR002477; KEGG: mdo:100021983 hypothetical protein LOC100021983; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Peptidoglycan binding-like; SPTR: Dentin sialophosphoprotein.
  
     0.613
AFZ05720.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: jan:Jann_1066 hemolysin-type calcium-binding protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
0.587
AFZ08356.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: cyt:cce_2195 hypothetical protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
0.584
AFZ07192.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR001343; KEGG: ter:Tery_4192 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
 
0.581
AFZ10368.1
Polymorphic outer membrane protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Calx-beta domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003368:IPR003644:IPR001343; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: Na-Ca exchanger/integrin-beta4; Polymorphic membrane protein, Chlamydia; Haemolysin-type calcium-binding repeat; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Putative uncharacterized protein; TIGRFAM: Polymorphic membrane protein, Chlamydia.
 
 
0.560
AFZ08105.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Type I secretion target GGXGXDXXX repeat protein domain protein.
 
 
0.550
AFZ07615.1
PFAM: Cna protein B-type domain; InterPro IPR008454; KEGG: ter:Tery_3048 Cna B-type; PFAM: Collagen-binding surface protein Cna-like, B-type domain; SPTR: Putative uncharacterized protein.
 
 
 0.476
AFZ04809.1
KEGG: cyj:Cyan7822_1899 cellulose-binding domain-containing protein; SPTR: Cellulose-binding domain protein.
  
 
 0.475
AFZ05811.1
S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: npu:Npun_F4027 S-layer domain-containing protein; PFAM: S-layer homology domain; SPTR: S-layer domain protein.
 
 
 0.475
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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