STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05445.1Amino acid ABC transporter membrane protein, PAAT family; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR001320:IPR001638:IPR000515:IPR010065; KEGG: npu:Npun_F6325 polar amino acid ABC transporter, inner membrane subunit; PFAM: Extracellular solute-binding protein, family 3; Binding-protein-dependent transport systems inne [...] (486 aa)    
Predicted Functional Partners:
AFZ05444.1
Phosphonate-transporting ATPase; PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: gmc:GY4MC1_1215 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Arginine transport ATP-binding protein artM.
 0.999
AFZ05440.1
PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439; KEGG: gmc:GY4MC1_1215 ABC transporter related protein; PFAM: ABC transporter-like; SPTR: Arginine transport ATP-binding protein artM.
 
 0.996
AFZ09219.1
L-glutamate ABC transporter ATP-binding protein; PFAM: ABC transporter; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ana:alr4167 ATP-binding protein of amino acid ABC transporter; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; neutral amino acid ABC transporter ATP-binding protein; L-aspartate ABC transporter ATP-binding protein.
 
 0.995
AFZ09222.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: ter:Tery_1999 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family.
 
0.853
AFZ09378.1
CheC, inhibitor of MCP methylation; PFAM: CheC-like family; COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation; InterPro IPR007597; KEGG: cyh:Cyan8802_0954 CheC, inhibitor of MCP methylation; PFAM: CheC-like protein; SPTR: CheC-like family.
    
   0.789
AFZ09220.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: ava:Ava_0738 amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; L-aspartate ABC transpor [...]
 
0.732
AFZ09223.1
PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: ava:Ava_0740 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein.
 
 
 0.732
argG
PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG0137 Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; InterPro IPR001518; KEGG: ter:Tery_0882 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.700
argH
PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR009049:IPR022761; KEGG: npu:Npun_F5831 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase.
  
  
 0.694
AFZ05433.1
PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR002872:IPR015590:IPR005932; KEGG: ter:Tery_3446 L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Proline dehydrogenase; SPTR: L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
  
  
 0.685
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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