STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05481.1PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: ter:Tery_3223 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component. (568 aa)    
Predicted Functional Partners:
AFZ05483.1
PFAM: Bacterial extracellular solute-binding protein; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: cyn:Cyan7425_3508 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Iron deficiency-induced protein A.
 
 
 0.993
AFZ05480.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439:IPR013611; KEGG: cyh:Cyan8802_1784 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.983
AFZ08506.1
Iron-chelate-transporting ATPase; PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: npu:Npun_R6022 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
  
 0.569
potA-2
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 0.497
AFZ08507.1
Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: npu:Npun_F1625 transport system permease protein; PFAM: ABC transporter permease protein; SPTR: Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
  
 0.446
AFZ07098.1
PFAM: Phosphoglycerate mutase family; InterPro IPR013078; KEGG: tmz:Tmz1t_3911 putative phosphohistidine phosphatase, SixA; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: Putative uncharacterized protein.
  
     0.445
AFZ05482.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyn:Cyan7425_2144 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Putative pentapeptide repeat-containing protein.
       0.421
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.417
AFZ08505.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: npu:Npun_R6215 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein.
   
  
 0.404
AFZ10035.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: ter:Tery_3943 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein.
   
  
 0.404
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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