STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (491 aa)    
Predicted Functional Partners:
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 0.998
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.997
AFZ06037.1
1,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193:IPR006047:IPR006048:IPR006589; KEGG: npu:Npun_R1027 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; Alpha-amylase, C-terminal all beta; PRIAM: 1,4-alpha-glucan branching enzyme; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative [...]
 
 0.979
AFZ05204.1
PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: npu:Npun_F5814 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77.
 
 
 0.957
glgA-2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 
0.923
AFZ05719.1
PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57; COGs: COG1543 conserved hypothetical protein; InterPro IPR004300:IPR015293; KEGG: tel:tll1974 hypothetical protein; PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; SPTR: Glycoside hydrolase family protein.
  
 
  0.906
AFZ06513.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: psl:Psta_1010 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Putative Glycosyl transferase group 1.
     
  0.900
AFZ09625.1
PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR015590:IPR001670; KEGG: cyc:PCC7424_3674 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase domain; PRIAM: Acetaldehyde dehydrogenase (acetylating); SPTR: Alcohol dehydrogenase, iron-containing family; alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.870
AFZ05533.1
PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: ava:Ava_2996 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; PRIAM: Phosphorylase; SPTR: Phosphorylase; TIGRFAM: Alpha-glucan phosphorylase.
 
  
 0.827
AFZ08284.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase; trehalose synthase-fused probable maltokinase; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047:IPR012810:IPR012811; KEGG: cyj:Cyan7822_5147 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Maltose alpha-D-glucosyltransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative Alpha amylase, catalytic domain subfamily; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; Trehalose synthase/probable maltokinase, C-terminal.
 
  
 0.818
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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