STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05524.1PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: cyc:PCC7424_5151 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; SPTR: Carbohydrate kinase, FGGY. (453 aa)    
Predicted Functional Partners:
AFZ10372.1
Ribulose-5-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: naz:Aazo_3229 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase.
    
 0.935
AFZ07001.1
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.870
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.865
AFZ09979.1
Transketolase central region; PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; COGs: COG3957 Phosphoketolase; InterPro IPR005475; KEGG: ana:alr1850 hypothetical protein; PFAM: Transketolase-like, pyrimidine-binding domain; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Transketolase, central region.
 
   
 0.659
AFZ06374.1
Type III effector Hrp-dependent outer; PFAM: Protein of unknown function, DUF1537; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: mar:MAE_38990 hypothetical protein; PFAM: Protein of unknown function, DUF1537; SPTR: Putative uncharacterized protein.
  
     0.632
AFZ07448.1
Microcompartments protein; PFAM: BMC domain; InterPro IPR000249; KEGG: npu:Npun_R1556 microcompartments protein; PFAM: Microcompartment protein, bacteria; SMART: Microcompartment protein, bacteria; SPTR: Microcompartments protein.
  
     0.601
AFZ07791.1
InterPro IPR004360; KEGG: ter:Tery_3471 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
   
 0.553
AFZ04797.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: family; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: npu:Npun_R5326 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.547
AFZ05525.1
KEGG: cyt:cce_2842 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.531
AFZ05526.1
KEGG: cyn:Cyan7425_4988 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.531
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.