STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05564.1PFAM: Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: npu:Npun_R6186 thioredoxin domain-containing protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain-containing protein; Belongs to the thioredoxin family. (125 aa)    
Predicted Functional Partners:
AFZ09968.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Thioredoxin; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR005982:IPR013027:IPR013766; KEGG: ana:all0737 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain; PRIAM: Thioredoxin-disulfide reductase., Protein-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase.
  
 
 0.781
AFZ06965.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: ter:Tery_0466 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin).
    
 
 0.747
AFZ06096.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: cyj:Cyan7822_2992 glutamate synthase (ferredoxin); PFAM: Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, central-C; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin).
    
 
 0.736
AFZ09425.1
Carbonate dehydratase; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide (three repeats); COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451:IPR000894; KEGG: ana:all0865 carbon dioxide concentrating mechanism protein; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide repeat; PRIAM: Carbonate dehydratase; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Carbonate dehydratase.
    
   0.689
AFZ05563.1
PFAM: NnrU protein; COGs: COG4094 membrane protein; InterPro IPR009915; KEGG: ter:Tery_2010 NnrU; SPTR: NnrU.
       0.662
AFZ09625.1
PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR015590:IPR001670; KEGG: cyc:PCC7424_3674 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase domain; PRIAM: Acetaldehyde dehydrogenase (acetylating); SPTR: Alcohol dehydrogenase, iron-containing family; alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.646
AFZ05204.1
PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: npu:Npun_F5814 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77.
      
 0.632
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
      
 0.632
AFZ05533.1
PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: ava:Ava_2996 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; PRIAM: Phosphorylase; SPTR: Phosphorylase; TIGRFAM: Alpha-glucan phosphorylase.
    
 
 0.606
AFZ08284.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase; trehalose synthase-fused probable maltokinase; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047:IPR012810:IPR012811; KEGG: cyj:Cyan7822_5147 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Maltose alpha-D-glucosyltransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative Alpha amylase, catalytic domain subfamily; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; Trehalose synthase/probable maltokinase, C-terminal.
      
 0.570
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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