STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
pebBPhycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family. (250 aa)    
Predicted Functional Partners:
AFZ05580.1
15,16-dihydrobiliverdin:ferredoxin oxidoreductase; PFAM: Ferredoxin-dependent bilin reductase; InterPro IPR009249; KEGG: cyp:PCC8801_4517 dihydrobiliverdin:ferredoxin oxidoreductase; PFAM: Ferredoxin-dependent bilin reductase; PRIAM: 15,16-dihydrobiliverdin:ferredoxin oxidoreductase; SPTR: Ferredoxin-dependent bilin reductase; Belongs to the HY2 family.
 
  
0.985
AFZ05581.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyj:Cyan7822_4036 phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
 
     0.872
AFZ05586.1
PFAM: CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR008213; KEGG: cyp:PCC8801_4529 phycobilisome linker polypeptide; PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; SPTR: Phycobilisome linker polypeptide:CpcD phycobilisome linker-like; Belongs to the phycobilisome linker protein family.
  
   
 0.818
AFZ05590.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyp:PCC8801_4515 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
  
   
 0.789
cpcS-2
CpeU protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.788
cpcS-3
Phycoerythrobilin lyase CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.788
AFZ05589.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyp:PCC8801_4516 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: CpeB.
 
   
 0.788
cpcT
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.787
AFZ05585.1
PFAM: CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR008213; KEGG: cyc:PCC7424_5724 phycobilisome linker polypeptide; PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; SPTR: Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.784
AFZ05575.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: npu:Npun_F3804 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein CpeF.
  
   
 0.783
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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