Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFZ05377.1 | AFZ05646.1 | Osc7112_0792 | Osc7112_1096 | PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: ter:Tery_0401 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat. | PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyt:cce_0905 RfrA pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein. | 0.761 |
AFZ05646.1 | AFZ05377.1 | Osc7112_1096 | Osc7112_0792 | PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyt:cce_0905 RfrA pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein. | PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: ter:Tery_0401 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat. | 0.761 |
AFZ05646.1 | AFZ05647.1 | Osc7112_1096 | Osc7112_1097 | PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyt:cce_0905 RfrA pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein. | PFAM: von Willebrand factor type A domain; Vault protein inter-alpha-trypsin; COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR013694:IPR002035:IPR006587; KEGG: cyj:Cyan7822_5287 vault protein inter-alpha-trypsin domain-containing protein; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor, type A; SMART: von Willebrand factor, type A; Vault protein inter-alpha-trypsin, metazoa; SPTR: Vault protein inter-alpha-trypsin. | 0.421 |
AFZ05647.1 | AFZ05646.1 | Osc7112_1097 | Osc7112_1096 | PFAM: von Willebrand factor type A domain; Vault protein inter-alpha-trypsin; COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR013694:IPR002035:IPR006587; KEGG: cyj:Cyan7822_5287 vault protein inter-alpha-trypsin domain-containing protein; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor, type A; SMART: von Willebrand factor, type A; Vault protein inter-alpha-trypsin, metazoa; SPTR: Vault protein inter-alpha-trypsin. | PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyt:cce_0905 RfrA pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein. | 0.421 |