STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05864.1PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: cyh:Cyan8802_3609 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein. (154 aa)    
Predicted Functional Partners:
AFZ05996.1
KEGG: ter:Tery_3950 TPR repeat-containing protein; SPTR: TPR repeat-containing protein.
  
     0.757
AFZ08598.1
KEGG: ter:Tery_4318 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
AFZ08370.1
KEGG: ter:Tery_0198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.735
AFZ05236.1
KEGG: cyh:Cyan8802_3627 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.732
AFZ09864.1
COGs: COG3937 conserved hypothetical protein; KEGG: ana:all1164 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.722
AFZ09939.1
KEGG: cyn:Cyan7425_3937 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
AFZ05735.1
KEGG: ava:Ava_1733 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
AFZ09536.1
InterPro IPR004365; KEGG: ter:Tery_4171 hypothetical protein; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Putative uncharacterized protein.
  
     0.695
AFZ06709.1
PFAM: Protein of unknown function (DUF3146); KEGG: ter:Tery_2871 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.675
AFZ07962.1
KEGG: ter:Tery_1469 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.