STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05921.1KEGG: npu:Npun_R3930 hypothetical protein; SPTR: Putative uncharacterized protein. (606 aa)    
Predicted Functional Partners:
AFZ05922.1
PFAM: Domain of unknown function (DUF1802); InterPro IPR014923; KEGG: ava:Ava_1250 hypothetical protein; PFAM: Protein of unknown function DUF1802; SPTR: Conserved domain protein.
       0.790
AFZ05920.1
KEGG: ava:Ava_1252 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.738
AFZ05195.1
NurA domain-containing protein; PFAM: NurA domain; InterPro IPR018977; KEGG: ter:Tery_2615 hypothetical protein; PFAM: NurA domain; SMART: NurA domain; SPTR: Putative uncharacterized protein.
   
 
 0.622
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.