STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05943.1KEGG: cyn:Cyan7425_4778 response regulator receiver protein; SPTR: Response regulator receiver protein. (49 aa)    
Predicted Functional Partners:
petC
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
       0.773
AFZ05945.1
PFAM: Protein of unknown function (DUF2892); KEGG: amr:AM1_0451 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.714
AFZ05946.1
KEGG: dat:HRM2_45060 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.624
AFZ05942.1
Delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase; COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: cyn:Cyan7425_4777 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Stearoyl-CoA 9-desaturase; SPTR: Delta-9 desaturase.
       0.519
AFZ05940.1
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.430
AFZ05941.1
PFAM: Radical SAM superfamily; COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197; KEGG: mar:MAE_21250 hypothetical protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein.
       0.430
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.