STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05946.1KEGG: dat:HRM2_45060 hypothetical protein; SPTR: Putative uncharacterized protein. (124 aa)    
Predicted Functional Partners:
AFZ05945.1
PFAM: Protein of unknown function (DUF2892); KEGG: amr:AM1_0451 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.675
AFZ05943.1
KEGG: cyn:Cyan7425_4778 response regulator receiver protein; SPTR: Response regulator receiver protein.
       0.624
petC
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
       0.624
AFZ05942.1
Delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase; COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: cyn:Cyan7425_4777 stearoyl-CoA 9-desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Stearoyl-CoA 9-desaturase; SPTR: Delta-9 desaturase.
       0.429
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.