STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05995.1PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092:IPR000361; KEGG: ter:Tery_3951 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; Belongs to the HesB/IscA family. (117 aa)    
Predicted Functional Partners:
AFZ09675.1
Glutaredoxin-like protein; PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family; COGs: COG0278 Glutaredoxin-related protein; InterPro IPR004480:IPR002109; KEGG: naz:Aazo_2784 glutaredoxin-like protein; PFAM: Glutaredoxin; SPTR: Glutaredoxin-like protein; TIGRFAM: Monothiol glutaredoxin-related; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.700
AFZ06372.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ava:Ava_0437 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.695
AFZ07179.1
PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: cyj:Cyan7822_3348 nitrogen-fixing NifU domain-containing protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Nitrogen-fixing NifU domain protein.
 
 
 0.679
AFZ05902.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: cyj:Cyan7822_0981 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aromatic amino acid beta-eliminating lyase/threonine aldolase.
 
  
 0.671
AFZ05996.1
KEGG: ter:Tery_3950 TPR repeat-containing protein; SPTR: TPR repeat-containing protein.
       0.547
AFZ07282.1
PFAM: Domain of unknown function (DUF1995); InterPro IPR018962; KEGG: ter:Tery_2247 hypothetical protein; PFAM: Domain of unknown function DUF1995; SPTR: Putative uncharacterized protein.
 
      0.507
AFZ05994.1
KEGG: ter:Tery_3953 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.486
AFZ09968.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Thioredoxin; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR005982:IPR013027:IPR013766; KEGG: ana:all0737 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain; PRIAM: Thioredoxin-disulfide reductase., Protein-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase.
 
  
 0.468
AFZ07651.1
PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439:IPR010230:IPR003593; KEGG: cyn:Cyan7425_3444 FeS assembly ATPase SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly.
  
 
 0.464
AFZ07650.1
PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR011542; KEGG: npu:Npun_F4824 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD.
  
 
 0.462
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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