STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06002.1KEGG: npu:Npun_R2396 hypothetical protein; SPTR: Putative uncharacterized protein. (300 aa)    
Predicted Functional Partners:
AFZ05347.1
KEGG: ter:Tery_1810 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.788
AFZ06003.1
Hypothetical protein.
       0.773
AFZ09776.1
KEGG: ter:Tery_3980 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.695
AFZ05507.1
KEGG: ter:Tery_2373 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.640
AFZ07638.1
KEGG: npu:Npun_R4977 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.628
AFZ09255.1
PFAM: Ycf66 protein N-terminus; InterPro IPR010004; KEGG: cyn:Cyan7425_0481 Ycf66 family protein; PFAM: Uncharacterised protein family Ycf66; SPTR: Putative uncharacterized protein.
  
     0.600
AFZ05157.1
Hypothetical protein; KEGG: npu:Npun_R0837 TPR repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.599
AFZ07474.1
KEGG: ter:Tery_1607 type IV pilus assembly protein PilO; SPTR: Putative Type IV pilus assembly protein PilO.
  
     0.598
AFZ04853.1
KEGG: ter:Tery_4714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
AFZ06709.1
PFAM: Protein of unknown function (DUF3146); KEGG: ter:Tery_2871 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.558
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.