STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06009.1Parallel beta-helix repeat protein; PFAM: Protein of unknown function (DUF1565); S-layer homology domain; TIGRFAM: parallel beta-helix repeat (two copies); InterProIPR022441:IPR011459:IPR001119:IPR006626:IPR 006633; KEGG: ava:Ava_4228 hypothetical protein; PFAM: Domain of unknown function DUF1565; S-layer homology domain; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Parallel beta-helix repeat-2. (487 aa)    
Predicted Functional Partners:
AFZ07960.1
KEGG: naz:Aazo_2735 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.800
AFZ07326.1
PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345:IPR019896; KEGG: ter:Tery_1755 polysaccharide pyruvyl transferase; PFAM: Polysaccharide pyruvyl transferase; SPTR: Polysaccharide pyruvyl transferase; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB.
  
     0.726
AFZ09034.1
PFAM: FHA domain; COGs: COG2339 membrane protein; InterPro IPR000253; KEGG: naz:Aazo_2709 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; SPTR: Putative uncharacterized protein.
  
     0.682
AFZ08469.1
InterPro IPR012902; KEGG: ter:Tery_4116 PHA accumulation regulator DNA-binding-like; SPTR: Putative uncharacterized protein.
  
     0.619
AFZ04938.1
KEGG: ana:alr3115 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.617
AFZ09634.1
KEGG: ana:all4038 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.612
AFZ04713.1
KEGG: ter:Tery_0244 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.591
AFZ08282.1
KEGG: ana:alr3583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.585
AFZ10374.1
Transcriptional attenuator, LytR family; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: ter:Tery_2604 cell envelope-related transcriptional attenuator; PFAM: Cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related transcriptional attenuator; TIGRFAM: Cell envelope-related transcriptional attenuator.
  
     0.571
AFZ08918.1
KEGG: ter:Tery_0244 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.558
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.