STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06083.1Von Willebrand factor type A; InterPro IPR002035; KEGG: mxa:MXAN_5133 hypothetical protein; SMART: von Willebrand factor, type A; SPTR: Conserved domain protein. (354 aa)    
Predicted Functional Partners:
AFZ05807.1
Isopenicillin-N epimerase; PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: cyj:Cyan7822_0165 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Isopenicillin-N epimerase; SPTR: Putative isopenicillin n epimerase protein.
  
     0.630
AFZ08352.1
PFAM: BsuBI/PstI restriction endonuclease C-terminus; Eco57I restriction endonuclease; InterPro IPR009528; KEGG: mar:MAE_29970 type II site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type II, BsuBI/PstI, C-terminal; PRIAM: Site-specific DNA-methyltransferase (adenine-specific)., Type II site-specific deoxyribonuclease; SPTR: Type II site-specific deoxyribonuclease.
  
     0.554
AFZ06084.1
KEGG: ter:Tery_2317 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.490
AFZ06058.1
KEGG: nde:NIDE1380 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.489
AFZ07238.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.481
AFZ10024.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.481
AFZ04950.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: ppy:PPE_01632 hypothetical protein; SPTR: Tat pathway signal sequence domain protein (Modular protein).
  
     0.478
AFZ06651.1
Hypothetical protein; PFAM: Dynamin family; KEGG: cyp:PCC8801_2227 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.464
AFZ07301.1
KEGG: cyc:PCC7424_1907 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.455
AFZ09289.1
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: npu:Npun_R5071 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase.
  
     0.423
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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