STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06084.1KEGG: ter:Tery_2317 hypothetical protein; SPTR: Putative uncharacterized protein. (324 aa)    
Predicted Functional Partners:
AFZ06853.1
COGs: COG3202 ATP/ADP translocase; InterPro IPR004155; KEGG: ter:Tery_0929 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein.
  
     0.765
AFZ08363.1
Hypothetical protein; KEGG: ter:Tery_4219 heterocyst differentiation protein; SPTR: Putative heterocyst differentiation protein.
  
     0.737
AFZ06700.1
KEGG: ter:Tery_3889 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.736
AFZ07845.1
KEGG: ter:Tery_2219 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.721
AFZ08282.1
KEGG: ana:alr3583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.700
AFZ06061.1
KEGG: ter:Tery_3403 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.689
AFZ04958.1
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors; PFAM: Adenylate and Guanylate cyclase catalytic domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR003018:IPR013767:IPR001054:IPR000014; KEGG: ter:Tery_0647 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; PAS fold; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; GAF; PAS; SPTR: Adenylate/guanylate cyclase.
  
     0.686
AFZ07816.1
Adenylate/guanylate cyclase with GAF sensor(s); PFAM: Adenylate and Guanylate cyclase catalytic domain; Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR003018:IPR003661:IPR003594:IPR 001054; KEGG: ter:Tery_3155 adenylate/guanylate cyclase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor dom [...]
  
     0.682
AFZ07763.1
Protein serine/threonine phosphatase with GAF(s) sensor(s); PFAM: Response regulator receiver domain; GAF domain; Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001789:IPR003018:IPR010822:IPR001932; KEGG: ter:Tery_4817 response regulator receiver modulated serine phosphatase with GAF sensor; PFAM: Sporulation stage II, protein E C-terminal; Signal transduction response regulator, receiver domain; GAF; SMART: Protein phosphatase 2C-like; Signal transduction response regulator, receiver domain; GAF; SPTR: Two-compone [...]
  
     0.663
AFZ10028.1
PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: npu:Npun_R0866 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.590
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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