STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06112.1KEGG: cyj:Cyan7822_1331 aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase. (93 aa)    
Predicted Functional Partners:
AFZ06111.1
Hypothetical protein; PFAM: Taurine catabolism dioxygenase TauD, TfdA family; KEGG: amd:AMED_5792 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.558
AFZ09439.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR020806:IPR000873:IPR006163:IPR 001242:IPR013624; KEGG: nde:NIDE1742 putative multi-domain non-ribosomal peptide synthetase; PFAM: Condensation domain; AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Non-ribosomal peptide synthetase; PRIAM: Long-chain-fatty-acid--[acyl-carrier-protein] lig [...]
  
 
 0.460
AFZ06110.1
Hypothetical protein; SPTR: Transposase.
       0.440
AFZ07280.1
PFAM: Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; KEGG: cyj:Cyan7822_2072 acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase family protein.
  
 
 0.413
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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