STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06197.1PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: ter:Tery_4185 histone deacetylase superfamily protein; PFAM: Histone deacetylase superfamily; SPTR: Histone deacetylase superfamily protein. (307 aa)    
Predicted Functional Partners:
AFZ05703.1
PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; InterPro IPR000330:IPR001650:IPR014001; KEGG: npu:Npun_F6355 helicase domain-containing protein; PFAM: Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Helicase domain protein.
    
 0.795
AFZ06267.1
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG1231 Monoamine oxidase; InterPro IPR006311:IPR002937; KEGG: gvi:gll1123 hypothetical protein; PFAM: Amine oxidase; PRIAM: Monoamine oxidase; SPTR: Putative uncharacterized protein.
    
 0.755
AFZ08319.1
ATP-binding region ATPase domain protein; Molecular chaperone. Has ATPase activity.
    
 0.680
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.450
AFZ04670.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: ava:Ava_0495 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phospha [...]
 
   
 0.446
AFZ09622.1
CoA-binding domain protein; PFAM: CoA binding domain; Acetyltransferase (GNAT) family; TIGRFAM: acetyl coenzyme A synthetase (ADP forming), alpha domain; COGs: COG1042 Acyl-CoA synthetase (NDP forming); InterPro IPR003781:IPR013650:IPR000182; KEGG: ava:Ava_4664 GCN5-related N-acetyltransferase; PFAM: CoA-binding; ATP-grasp fold, succinyl-CoA synthetase-type; GCN5-related N-acetyltransferase (GNAT) domain; SMART: CoA-binding; SPTR: GCN5-related N-acetyltransferase.
 
     0.444
AFZ07755.1
PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterProIPR000330:IPR001650:IPR006141:IPR003587:IPR 014001:IPR003586; KEGG: ter:Tery_1543 protein splicing site; PFAM: Helicase, C-terminal; SNF2-related; SMART: Helicase, C-terminal; Hedgehog/intein hint domain, C-terminal; DEAD-like helicase, N-terminal; Hedgehog/intein hint, N-terminal; SPTR: Protein splicing site.
    
 0.428
AFZ09146.1
PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG1111 ERCC4-like helicase; InterPro IPR000330:IPR001650:IPR014001; KEGG: ter:Tery_4237 helicase-like; PFAM: Helicase, C-terminal; SNF2-related; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Helicase-like.
    
 0.428
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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