STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06209.1PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: ter:Tery_1079 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter. (296 aa)    
Predicted Functional Partners:
AFZ06199.1
Sulfate-transporting ATPase; PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ava:Ava_0191 ABC transporter-like; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ABC transporter ATPase subunit.
  
 0.885
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.625
AFZ08005.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis cyclodehydratase domain; bacteriocin biosynthesis docking scaffold, SagD family; COGs: COG1944 conserved hypothetical protein; InterPro IPR022291:IPR003776; KEGG: ter:Tery_2355 hypothetical protein; PFAM: YcaO-like; SPTR: Putative uncharacterized protein; TIGRFAM: Bacteriocin biosynthesis, cyclodehydratase; YcaO-like.
  
  
 0.595
AFZ08009.1
SagB-type dehydrogenase domain protein; PFAM: Nitroreductase family; Subtilase family; TIGRFAM: SagB-type dehydrogenase domain; cyanobactin maturation protease, PatA/PatG family; InterPro IPR020051:IPR000209; KEGG: ter:Tery_2365 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Similar to A0YXD9_9CYAN Hypothetical protein; TIGRFAM: SagB-type dehydrogenase domain.
  
  
 0.575
AFZ06561.1
PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain; InterPro IPR020051:IPR000415; KEGG: naz:Aazo_1730 SagB-type dehydrogenase domain-containing protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; TIGRFAM: SagB-type dehydrogenase domain.
  
  
 0.542
AFZ09373.1
PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: aca:ACP_2901 nitroreductase family protein; PFAM: Nitroreductase-like; SPTR: NADH dehydrogenase.
  
  
 0.542
AFZ06208.1
KEGG: syn:ssl3615 hypothetical protein; SPTR: Ssl3615 protein.
       0.522
cpcS
Phycobilin lyase, CpcU subunit; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.506
AFZ05682.1
Sulfate-transporting ATPase; PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ana:alr0077 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein.
  
 0.500
AFZ07085.1
PFAM: Domain of unknown function (DUF1825); InterPro IPR014954; KEGG: ava:Ava_0927 hypothetical protein; PFAM: Protein of unknown function DUF1825; SPTR: Putative uncharacterized protein.
  
     0.497
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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