STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06255.1Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: gvi:glr2510 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Ser/Thr protein phosphatase family protein. (533 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.974
AFZ05105.1
KEGG: npu:Npun_R1321 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 0.935
AFZ08327.1
KEGG: npu:Npun_R3785 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFZ04884.1
SMC domain protein; TIGRFAM: exonuclease SbcC; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: ttj:TTHA1288 exonuclease SbcC; PFAM: RecF/RecN/SMC; SPTR: Putative uncharacterized protein.
  
 0.739
AFZ06245.1
SMC domain protein; TIGRFAM: exonuclease SbcC; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: ter:Tery_3877 exonuclease SbcC; PFAM: RecF/RecN/SMC; SPTR: Exonuclease SbcC.
  
 0.739
AFZ09859.1
TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; KEGG: ter:Tery_2151 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 0.739
AFZ10135.1
Glyoxalase/bleomycin resistance protein/dioxygenase; InterPro IPR004360; KEGG: amr:AM1_3149 glyoxalase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase family protein.
  
     0.733
AFZ08330.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: cyt:cce_3886 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.731
AFZ08400.1
Hypothetical protein; PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903:IPR019060:IPR011756; KEGG: cyc:PCC7424_3366 hypothetical protein; PFAM: Domain of unknown function DUF2382, C-terminal; PRC-barrel; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02271, C-terminal.
  
     0.723
AFZ07103.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: cyn:Cyan7425_3271 CsbD family protein; PFAM: CsbD-like; SPTR: Putative uncharacterized protein; Belongs to the UPF0337 (CsbD) family.
  
     0.696
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.