STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06262.1KEGG: syn:ssl2922 virulence associated protein B; SPTR: Virulence associated protein B. (76 aa)    
Predicted Functional Partners:
AFZ06263.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: dal:Dalk_1528 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.
 
 
 0.978
AFZ07470.1
PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: mar:MAE_18130 hypothetical protein; PFAM: PilT protein, N-terminal; SPTR: Putative uncharacterized protein.
 
 
 0.763
AFZ05177.1
Hypothetical protein; PFAM: PIN domain; KEGG: cyh:Cyan8802_3124 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.662
AFZ08980.1
PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: mhu:Mhun_1663 PilT protein-like; PFAM: PilT protein, N-terminal; SPTR: PilT protein-like.
 
 
 0.651
AFZ05892.1
KEGG: cyc:PCC7424_1323 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.600
AFZ07567.1
KEGG: cyt:cce_1228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.600
AFZ07682.1
KEGG: cyt:cce_1228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.600
AFZ07683.1
KEGG: cyt:cce_1228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.600
AFZ08887.1
KEGG: cyt:cce_1228 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.600
vapC-3
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
 
 0.600
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.