STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06345.1KEGG: npu:Npun_R5784 hypothetical protein; SPTR: Putative uncharacterized protein. (73 aa)    
Predicted Functional Partners:
AFZ06344.1
PFAM: PemK-like protein; KEGG: cyh:Cyan8802_1846 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ06342.1
PFAM: Protein of unknown function (DUF2393); TIGRFAM: TIGR02588 family protein; InterPro IPR013417; KEGG: ava:Ava_2012 hypothetical protein; PFAM: Conserved hypothetical protein CHP02588; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02588.
       0.603
AFZ06343.1
PFAM: Putative integral membrane protein (DUF2391); TIGRFAM: putative integral membrane protein TIGR02587; COGs: COG4711 membrane protein; InterPro IPR013416; KEGG: npu:Npun_F3255 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02587, putative integral membrane.
       0.603
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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