STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06394.1PFAM: Protein of unknown function (DUF1460); InterPro IPR010846; KEGG: ter:Tery_4429 hypothetical protein; PFAM: Protein of unknown function DUF1460; SPTR: Putative uncharacterized protein. (376 aa)    
Predicted Functional Partners:
AFZ08351.1
Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: ava:Ava_2008 putative transmembrane permease; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative Major facilitator superfamily MFS_1.
  
     0.655
AFZ06393.1
KEGG: ter:Tery_0337 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.522
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
 
     0.411
AFZ04739.1
Hypothetical protein; PFAM: PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; KEGG: ter:Tery_1353 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 
 0.411
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
   
 
 0.409
AFZ05671.1
Translation elongation factor 2 (EF-2/EF-G); PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 005225; KEGG: ava:Ava_3294 elongation factor G; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SMART [...]
   
 
 0.409
fusA-2
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
   
 
 0.409
AFZ06159.1
Hypothetical protein; COGs: COG4929 Uncharacterized membrane-anchored protein; KEGG: ter:Tery_1591 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.404
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.