STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06485.1ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; COGs: COG0474 Cation transport ATPase; InterProIPR001757:IPR004014:IPR008250:IPR005834:IPR 006068; KEGG: npu:Npun_R6170 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase [...] (940 aa)    
Predicted Functional Partners:
AFZ10122.1
Hypothetical protein; PFAM: Zeta toxin; COGs: COG2187 conserved hypothetical protein; KEGG: npu:Npun_F0614 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.477
AFZ06645.1
Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR003148:IPR006037; KEGG: npu:Npun_R2672 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Sodium/hydrogen exchanger; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.457
AFZ05667.1
MgtC/SapB transporter; PFAM: MgtC family; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: mar:MAE_51700 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: Protein srpB.
  
 
 0.415
AFZ07959.1
MgtC/SapB transporter; PFAM: MgtC family; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: ava:Ava_3389 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: MgtC/SapB transporter; manually curated.
  
 
 0.415
AFZ09975.1
Sodium/proton antiporter, CPA1 family; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153:IPR003148; KEGG: ter:Tery_0859 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Sodium/hydrogen exchanger; TC 2.A.36; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.405
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.
       0.403
AFZ08009.1
SagB-type dehydrogenase domain protein; PFAM: Nitroreductase family; Subtilase family; TIGRFAM: SagB-type dehydrogenase domain; cyanobactin maturation protease, PatA/PatG family; InterPro IPR020051:IPR000209; KEGG: ter:Tery_2365 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Similar to A0YXD9_9CYAN Hypothetical protein; TIGRFAM: SagB-type dehydrogenase domain.
  
 
 0.402
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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