STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06555.1PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: gfo:GFO_1917 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase family. (430 aa)    
Predicted Functional Partners:
AFZ09854.1
PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3021 conserved hypothetical protein; InterPro IPR005135; KEGG: hau:Haur_2679 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase.
  
     0.512
AFZ06554.1
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG0346 Lactoylglutathione lyase and related lyase; InterPro IPR004360; KEGG: npu:Npun_F1142 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.504
AFZ08486.1
PFAM: Predicted nucleotidyltransferase; COGs: COG3541 nucleotidyltransferase; InterPro IPR018775; KEGG: amr:AM1_1095 hypothetical protein; PFAM: Nucleotidyltransferase, predicted; SPTR: Putative uncharacterized protein.
  
     0.454
AFZ09441.1
Propeptide PepSY amd peptidase M4; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625:IPR005075; KEGG: tbd:Tbd_0714 hypothetical protein; PFAM: Peptidase M4, propeptide, PepSY; PepSY-associated TM helix; SPTR: Putative uncharacterized protein.
  
     0.400
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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