STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06557.1PFAM: Dynamin family; InterPro IPR001401; KEGG: npu:Npun_R6512 dynamin family protein; PFAM: Dynamin, GTPase domain; SPTR: Dynamin family protein. (556 aa)    
Predicted Functional Partners:
AFZ06558.1
PFAM: Dynamin family; InterPro IPR001401; KEGG: ana:all4414 hypothetical protein; PFAM: Dynamin, GTPase domain; SPTR: Dynamin family protein.
 
    
0.822
AFZ07779.1
KEGG: scl:sce1270 hypothetical protein; SPTR: HIRAN domain family.
  
     0.723
AFZ07200.1
Putative signal transduction protein with Nacht domain; PFAM: NACHT domain; COGs: COG5635 NTPase (NACHT family); InterPro IPR004155:IPR003593; KEGG: ana:all3892 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SMART: ATPase, AAA+ type, core; PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein.
  
     0.703
AFZ05932.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253; KEGG: ava:Ava_0821 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; SPTR: FHA domain protein.
  
     0.646
AFZ06559.1
KEGG: amr:AM1_1407 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.646
AFZ08505.1
PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: npu:Npun_R6215 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein.
  
     0.640
AFZ10226.1
PFAM: Predicted membrane protein (DUF2207); KEGG: ava:Ava_2789 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.624
AFZ06556.1
KEGG: nve:NEMVE_v1g100968 hypothetical protein; SPTR: Putative uncharacterized protein OJ1506_A04.3.
       0.608
AFZ05018.1
PFAM: Protein of unknown function (DUF433); InterPro IPR007367; KEGG: rmr:Rmar_1887 protein of unknown function DUF433; PFAM: Protein of unknown function DUF433; SPTR: Putative uncharacterized protein.
  
     0.546
AFZ09827.1
PFAM: DNA/RNA non-specific endonuclease; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein.
  
     0.520
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.