STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06569.1PFAM: Tetratricopeptide repeat; COGs: COG4995 conserved hypothetical protein; InterPro IPR001440:IPR019734; KEGG: npu:Npun_R1943 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein. (1078 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.637
AFZ05491.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; PFAM: ABC transporter; FHA domain; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR000253:IPR003593:IPR003439:IPR013525; KEGG: ter:Tery_4431 FHA domain-containing protein; PFAM: ABC transporter-like; Forkhead-associated (FHA) domain; ABC-2 type transporter; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; Forkhead-associated (FHA) domain; SPTR: FHA domain containing protein.
 
 
 0.521
AFZ06570.1
KEGG: cyj:Cyan7822_1090 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.510
AFZ07694.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG3914 O-linked N-acetylglucosamine transferase SPINDLY family; InterPro IPR013105:IPR001440:IPR019734; KEGG: ter:Tery_4945 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
 
   0.466
AFZ09704.1
GAF sensor hybrid histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003018:IPR003661:IPR003594:IPR 001789; KEGG: ava:Ava_4696 GAF sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; HAMP linker domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-bindin [...]
   
 
 0.465
AFZ09180.1
PFAM: Tetratricopeptide repeat; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR001440:IPR013105:IPR019734; KEGG: ter:Tery_1492 glycosyl transferase family protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.
 
   0.463
AFZ08319.1
ATP-binding region ATPase domain protein; Molecular chaperone. Has ATPase activity.
  
 0.461
AFZ09304.1
KEGG: bth:BT_0446 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.455
AFZ05556.1
PFAM: Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR001223:IPR011583; KEGG: fgr:FG00105.1 hypothetical protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II; SPTR: Putative uncharacterized protein.
  
    0.452
AFZ06260.1
(Myosin heavy-chain) kinase; PFAM: Pentapeptide repeats (8 copies); WD domain, G-beta repeat; NACHT domain; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR001646:IPR019781; KEGG: ana:alr3466 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; Pentapeptide repeat; PRIAM: [Myosin heavy-chain] kinase; SMART: WD40 repeat; SPTR: Uncharacterized WD repeat-containing protein alr3466.
 
 
  0.452
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.