STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06655.1PFAM: PemK-like protein; KEGG: npu:Npun_R3511 hypothetical protein; SPTR: Putative uncharacterized protein. (109 aa)    
Predicted Functional Partners:
AFZ06656.1
PFAM: Protein of unknown function (DUF2281); KEGG: ter:Tery_1072 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
psbB
Photosystem II chlorophyll-binding protein CP47; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.
    
   0.589
AFZ05573.1
KEGG: naz:Aazo_2645 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
 
 0.504
AFZ05286.1
SpoVT/AbrB domain-containing protein; InterPro IPR007159; KEGG: mar:MAE_02330 PemI-like suppressor; SMART: Transcription regulator AbrB/SpoV, predicted; SPTR: PemI-like suppressor.
  
 
 0.446
AFZ10311.1
Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT / AbrB like domain; COGs: COG2336 Growth regulator; InterPro IPR007159; KEGG: cyn:Cyan7425_4160 transcriptional regulator/antitoxin, MazE; PFAM: Transcription regulator AbrB/SpoV, predicted; SMART: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator/antitoxin, MazE.
  
 
 0.446
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.