STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06723.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
AFZ06722.1
Diguanylate cyclase with PAS/PAC and GAF sensors; PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterProIPR000014:IPR000160:IPR013655:IPR003018:IPR 013767:IPR001610; KEGG: syn:sll0779 PleD-like-protein; PFAM: Diguanylate cyclase, predicted; PAS fold-3; GAF; PAS fold; SMART: Diguanylate cyclase, predicted; GAF; PAC motif; PAS; SPTR: Sll0779 protein; TIGRFAM: Diguanylate cyclase, predicted; PAS.
       0.773
AFZ06721.1
Phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR004449:IPR013078; KEGG: ter:Tery_1581 phosphohistidine phosphatase, SixA; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; SPTR: Phosphohistidine phosphatase, SixA; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup.
       0.516
AFZ06724.1
Transposase like protein; COGs: COG5421 Transposase; KEGG: mar:MAE_52020 transposase like; SPTR: Transposase like.
       0.500
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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