STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06727.1PFAM: HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR002711:IPR003615; KEGG: npu:Npun_R5632 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease. (165 aa)    
Predicted Functional Partners:
AFZ10086.1
PFAM: HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR003615:IPR002711; KEGG: npu:Npun_F6302 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease.
  
     0.765
AFZ06726.1
Phosphoesterase RecJ domain protein; PFAM: DHH family; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667; KEGG: ana:all0184 hypothetical protein; PFAM: Phosphoesterase, RecJ-like; SPTR: Putative uncharacterized protein.
       0.468
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.