STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06845.1YHS domain-containing protein; PFAM: YHS domain; InterPro IPR007029; KEGG: syf:Synpcc7942_1871 hypothetical protein; PFAM: YHS; SPTR: YHS domain family. (276 aa)    
Predicted Functional Partners:
AFZ06623.1
Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] domain; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: npu:Npun_R0364 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein.
   
   0.715
AFZ06832.1
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941:IPR012748; KEGG: amr:AM1_3207 nitrite reductase (NAD(P)H), small subunit, putative; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Putative Nitrite reductase (NAD(P)H), small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD.
   
   0.715
AFZ06846.1
Hypothetical protein; PFAM: Cysteine dioxygenase type I; COGs: COG5553 metal-dependent protein of the double-stranded beta helix superfamily; KEGG: amr:AM1_1482 hypothetical protein; SPTR: Genome sequencing data, contig C317.
 
     0.580
AFZ05702.1
PFAM: Glutathione S-transferase, C-terminal domain; COGs: COG0625 Glutathione S-transferase; InterPro IPR004045:IPR004046; KEGG: amr:AM1_1074 glutathione-S-transferase domain-containing protein; PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; SPTR: Putative Glutathione-S-transferase domain protein.
  
     0.491
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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