STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06859.1Transposase IS4 family protein; PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: mar:MAE_11690 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase. (281 aa)    
Predicted Functional Partners:
AFZ06860.1
Hypothetical protein; KEGG: bja:blr6022 general secretion pathway protein D; SPTR: Blr6022 protein.
       0.773
AFZ08009.1
SagB-type dehydrogenase domain protein; PFAM: Nitroreductase family; Subtilase family; TIGRFAM: SagB-type dehydrogenase domain; cyanobactin maturation protease, PatA/PatG family; InterPro IPR020051:IPR000209; KEGG: ter:Tery_2365 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Similar to A0YXD9_9CYAN Hypothetical protein; TIGRFAM: SagB-type dehydrogenase domain.
 
    0.754
AFZ08002.1
Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family; TIGRFAM: cyanobactin maturation protease, PatA/PatG family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: cyj:Cyan7822_6539 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Putative uncharacterized protein.
  
    0.705
AFZ08005.1
PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; bacteriocin biosynthesis cyclodehydratase domain; bacteriocin biosynthesis docking scaffold, SagD family; COGs: COG1944 conserved hypothetical protein; InterPro IPR022291:IPR003776; KEGG: ter:Tery_2355 hypothetical protein; PFAM: YcaO-like; SPTR: Putative uncharacterized protein; TIGRFAM: Bacteriocin biosynthesis, cyclodehydratase; YcaO-like.
  
     0.549
AFZ05986.1
Helicase superfamily 3; COGs: COG3378 ATPase; KEGG: npu:Npun_EF019 helicase superfamily 3; SPTR: Helicase superfamily 3.
  
     0.545
AFZ05177.1
Hypothetical protein; PFAM: PIN domain; KEGG: cyh:Cyan8802_3124 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.543
AFZ05849.1
Transposase family protein; PFAM: Transposase; TIGRFAM: DNA binding domain, excisionase family; InterPro IPR002622; KEGG: mar:MAE_25500 transposase; PFAM: Transposase, Synechocystis PCC 6803; SPTR: Transposase.
  
     0.543
AFZ09215.1
Hypothetical protein; COGs: COG3378 ATPase; KEGG: npu:Npun_EF019 helicase superfamily 3; SPTR: Helicase superfamily 3.
  
     0.541
AFZ05831.1
Protein of unknown function DUF893, YccS/YhfK; PFAM: Fusaric acid resistance protein family; COGs: COG1289 membrane protein; KEGG: npu:Npun_R2278 protein of unknown function DUF893, YccS/YhfK; SPTR: Putative uncharacterized protein.
 
     0.515
AFZ05556.1
PFAM: Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR001223:IPR011583; KEGG: fgr:FG00105.1 hypothetical protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II; SPTR: Putative uncharacterized protein.
  
 
 0.514
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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