STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06888.1PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ara:Arad_9152 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Putative Glycosyltransferase. (373 aa)    
Predicted Functional Partners:
AFZ06887.1
KEGG: amr:AM1_4422 hypothetical protein; SPTR: 8-amino-7-oxononanoate synthase.
       0.762
AFZ04869.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173:IPR001296; KEGG: nhl:Nhal_3660 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; Glycosyl transferase, group 1; SPTR: Glycosyl transferase family 2.
  
    0.469
AFZ04966.1
PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; COGs: COG0438 Glycosyltransferase; InterPro IPR001173:IPR001296; KEGG: ter:Tery_1360 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 1.
 
 
 0.437
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.