STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06897.1PFAM: SirA-like protein; InterPro IPR001455; KEGG: cyn:Cyan7425_4691 hypothetical protein; PFAM: SirA-like; SPTR: SirA-like; Belongs to the sulfur carrier protein TusA family. (96 aa)    
Predicted Functional Partners:
rsgA
Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
     0.916
AFZ05902.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: cyj:Cyan7822_0981 class V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aromatic amino acid beta-eliminating lyase/threonine aldolase.
   
 
 0.811
AFZ06372.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ava:Ava_0437 aromatic amino acid beta-eliminating lyase/threonine aldolase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.811
AFZ05633.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901:IPR001763; KEGG: ava:Ava_0994 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; SPTR: Putative uncharacterized protein.
 
  
 0.728
AFZ09987.1
Molybdopterin synthase subunit MoaD; PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal; InterPro IPR010038:IPR003749; KEGG: ter:Tery_4349 MoaD family protein; PFAM: ThiamineS; SPTR: MoaD family protein; TIGRFAM: MoaD, archaeal.
 
 
 
 0.683
AFZ05632.1
PFAM: Mov34/MPN/PAD-1 family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: ter:Tery_1109 Mov34/MPN/PAD-1; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1.
 
     0.673
AFZ06900.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: ter:Tery_4449 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
 
     0.475
dnaJ
Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
       0.468
AFZ06899.1
PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: ter:Tery_4448 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; TC 2.C.1.1.1.
       0.425
AFZ10384.1
PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR011867:IPR003593:IPR000515:IPR003439; KEGG: npu:Npun_F3656 molybdate ABC transporter, inner membrane subunit; PFAM: ABC transporter-like; Binding-protein-dependent transport systems inner membrane component; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ATP-binding protein of ABC transporter; TIGRFAM: Molybdate ABC transporter, [...]
  
  
 0.418
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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