STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ06943.1PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR003593; KEGG: amr:AM1_5275 methanol dehydrogenase regulatory protein, putative; PFAM: ATPase, AAA-3; SMART: ATPase, AAA+ type, core; SPTR: Methanol dehydrogenase regulatory protein, putative. (320 aa)    
Predicted Functional Partners:
AFZ06941.1
PFAM: Transglutaminase-like superfamily; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: dal:Dalk_1546 transglutaminase domain protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; SPTR: Transglutaminase domain protein.
 
   
 0.937
AFZ06942.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dal:Dalk_1547 protein of unknown function DUF58; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein.
 
  
 0.908
AFZ06944.1
PFAM: Opioid growth factor receptor (OGFr) conserved region; InterPro IPR006757; KEGG: npu:Npun_F4273 opioid growth factor receptor (OGFr) region; PFAM: Opioid growth factor receptor (OGFr) conserved region; SPTR: Opioid growth factor receptor (OGFr) conserved region.
  
    0.610
AFZ05210.1
PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; COGs: COG1982 Arginine/lysine/ornithine decarboxylase; InterPro IPR000310:IPR008286; KEGG: npu:Npun_F0489 Orn/Lys/Arg decarboxylase, major region; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal; PRIAM: Arginine decarboxylase; SPTR: Orn/Lys/Arg decarboxylase.
   
 
 0.430
AFZ06864.1
PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: ter:Tery_1569 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein.
 
  
 0.407
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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