STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07004.1Xenobiotic-transporting ATPase; PFAM: ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439:IPR003593; KEGG: npu:Npun_F5365 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related. (631 aa)    
Predicted Functional Partners:
AFZ07005.1
WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781:IPR001680; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: Serine/threonine kinase with WD-40 repeat.
   
   0.650
AFZ07502.1
PFAM: DNA/RNA non-specific endonuclease; 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein.
  
     0.551
AFZ09816.1
Ig domain protein group 2 domain protein; InterPro IPR003343:IPR002640; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: Bacterial Ig-like, group 2; Arylesterase; SPTR: YD repeat protein.
  
     0.501
AFZ09276.1
PFAM: DNA/RNA non-specific endonuclease; 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cyj:Cyan7822_6035 YD repeat-containing protein; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: YD repeat protein.
  
     0.464
AFZ09430.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Male sterility protein; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; thioester reductase domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR010080:IPR001242:IPR000873:IPR 006163:IPR013120:IPR020806; KEGG: npu:Npun_R3433 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Male sterility, NAD-binding; SMART: Polyketide synthase, phosph [...]
  
 
 0.462
AFZ10260.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter transmembrane region; Peptidase C39 family; ABC transporter; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR000595:IPR005074:IPR001140:IPR 003439; KEGG: cyc:PCC7424_3519 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter-like; Peptidase C39, bacterio [...]
 
 
 
0.462
AFZ07006.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyh:Cyan8802_1681 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
 
     0.437
AFZ08001.1
PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR005074:IPR001140:IPR003439; KEGG: ter:Tery_0625 bacteriocin-processing peptidase; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane domain; PRIAM: Peptide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39.
 
 
  
0.408
AFZ07951.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; PilZ domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR020806:IPR010071:IPR001242:IPR000873:IPR 009875:IPR006163:IPR001031; KEGG: npu:Npun_R6588 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Type IV pilus assembly PilZ; Phosphopantetheine-binding; Thioesterase; PRIAM: Glutamate racemase; SMART: Poly [...]
 
 
 0.404
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.