STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07021.1Sodium/proton antiporter NhaS3, CPA2 family; PFAM: Sodium/hydrogen exchanger family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: mar:MAE_62110 Na+/H+ antiporter; PFAM: Cation/H+ exchanger; SPTR: Genome sequencing data, contig C319; TC 2.A.37.2.4. (469 aa)    
Predicted Functional Partners:
AFZ06865.1
Cl- channel voltage-gated family protein; PFAM: CBS domain; Voltage gated chloride channel; Universal stress protein family; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644:IPR006016; KEGG: npu:Npun_R1817 Cl-channel, voltage-gated family protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; UspA; SMART: Cystathionine beta-synthase, core; SPTR: Cl-channel, voltage-gated family protein.
 
   
 0.463
AFZ09123.1
Cl- channel voltage-gated family protein; PFAM: CBS domain; Voltage gated chloride channel; Universal stress protein family; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644:IPR006016; KEGG: ana:alr4891 hypothetical protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; UspA; SMART: Cystathionine beta-synthase, core; SPTR: Putative uncharacterized protein.
 
   
 0.450
AFZ05333.1
KEGG: ava:Ava_0665 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.416
hisA
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro IPR006062:IPR006063:IPR023016; KEGG: cyc:PCC7424_4950 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthe [...]
       0.407
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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