STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07027.1PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: ava:Ava_1579 TonB box-like; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, barrel. (145 aa)    
Predicted Functional Partners:
AFZ07026.1
PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: npu:Npun_F2433 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Putative uncharacterized protein.
 
     0.796
AFZ07227.1
Hypothetical protein; PFAM: Ureidoglycolate hydrolase; KEGG: npu:Npun_F1500 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.753
AFZ08778.1
PFAM: Protein of unknown function (DUF3172); KEGG: cyj:Cyan7822_0819 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.680
AFZ09805.1
KEGG: ter:Tery_3744 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.670
AFZ08119.1
KEGG: npu:Npun_F3847 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.633
AFZ08926.1
KEGG: ana:alr3505 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ05191.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734; KEGG: ter:Tery_1403 TPR repeat-containing protein; SPTR: Putative TPR repeat-containing protein.
 
     0.626
AFZ09536.1
InterPro IPR004365; KEGG: ter:Tery_4171 hypothetical protein; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Putative uncharacterized protein.
  
     0.626
AFZ07962.1
KEGG: ter:Tery_1469 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.615
AFZ07708.1
PFAM: Ycf66 protein N-terminus; InterPro IPR010004; KEGG: npu:Npun_R5948 Ycf66 family protein; PFAM: Uncharacterised protein family Ycf66; SPTR: Putative uncharacterized protein.
  
     0.596
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.