STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07051.1PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: cyc:PCC7424_2847 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein. (120 aa)    
Predicted Functional Partners:
AFZ07050.1
KEGG: cyp:PCC8801_0597 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.563
AFZ10253.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR019734:IPR013105:IPR001440; KEGG: nwi:Nwi_0964 TPR and WD-40 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat and WD-40 repeat protein.
 
     0.469
AFZ07400.1
PFAM: haloacid dehalogenase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: ava:Ava_4912 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Putative uncharacterized protein.
  
     0.456
AFZ06850.1
KEGG: ava:Ava_1988 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.448
AFZ05236.1
KEGG: cyh:Cyan8802_3627 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
cpcT-3
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.441
AFZ10356.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; cyanoexosortase B; exosortase; InterPro IPR013426:IPR019127; KEGG: ter:Tery_2693 eight transmembrane protein EpsH; PFAM: Exosortase EpsH-related; SPTR: Eight transmembrane protein EpsH; TIGRFAM: Exosortase, EpsH.
  
     0.410
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.