STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07091.1DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; InterPro IPR002941; KEGG: cyc:PCC7424_5156 hypothetical protein; PFAM: DNA methylase N-4/N-6; SPTR: Putative uncharacterized protein. (422 aa)    
Predicted Functional Partners:
AFZ07090.1
Restriction endonuclease, type II, Bpu10I; PFAM: Bpu10I restriction endonuclease; InterPro IPR018577; KEGG: cyc:PCC7424_5155 hypothetical protein; PFAM: Restriction endonuclease, type II, Bpu10I; SPTR: Putative uncharacterized protein.
       0.773
AFZ06101.1
UPF0161 protein yidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.547
AFZ06677.1
ATPase-like protein; COGs: COG4637 ATPase; KEGG: cyj:Cyan7822_3334 ATPase-like protein; SPTR: Putative uncharacterized protein.
  
     0.488
AFZ07566.1
KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.
  
    0.465
AFZ07092.1
Phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122:IPR005273; KEGG: ava:Ava_0893 phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein.
       0.460
AFZ05726.1
KEGG: npu:Npun_F6020 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.414
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.