STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07230.1KEGG: str:Sterm_2577 hypothetical protein; SPTR: Putative uncharacterized protein. (150 aa)    
Predicted Functional Partners:
AFZ07229.1
KEGG: bph:Bphy_7344 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.752
AFZ07228.1
Cytosine deaminase; PFAM: Amidohydrolase family; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR013108; KEGG: rxy:Rxyl_0224 N-isopropylammelide isopropylaminohydrolase; PFAM: Amidohydrolase 3; PRIAM: Cytosine deaminase; SPTR: Amidohydrolase family, putative.
       0.678
AFZ07231.1
KGK family protein; PFAM: KGK domain; InterPro IPR014971; KEGG: npu:Npun_R1151 hypothetical protein; PFAM: KGK; SPTR: Putative uncharacterized protein.
       0.596
AFZ07232.1
KEGG: ter:Tery_0520 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.400
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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