STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07270.1TIGRFAM: conserved hypothetical protein; COGs: COG4370 conserved hypothetical protein; InterPro IPR019994; KEGG: npu:Npun_R1454 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03492. (466 aa)    
Predicted Functional Partners:
AFZ08959.1
Putative lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.
 
     0.782
AFZ07429.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: ter:Tery_1234 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Carbohydrate-selective porin OprB; TC 1.B.23; Belongs to the OprB family.
  
     0.735
AFZ06064.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: ter:Tery_4466 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Putative uncharacterized protein; TC 1.B.23; Belongs to the OprB family.
  
     0.731
AFZ04695.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: ana:alr4069 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein.
 
     0.688
AFZ06717.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cyj:Cyan7822_3118 family 2 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family protein.
  
     0.684
AFZ07527.1
KEGG: cyj:Cyan7822_3182 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.648
AFZ08858.1
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ter:Tery_1715 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase.
  
     0.640
AFZ09657.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.630
AFZ08710.1
PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: chloroplast envelope protein translocase, IAP75 family; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: ter:Tery_4653 surface antigen (D15); PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Surface antigen variable number.
 
     0.609
AFZ09658.1
PFAM: Protein of unknown function (DUF3084); COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: npu:Npun_F5512 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.603
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.