STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07304.1KEGG: ana:all1476 hypothetical protein; SPTR: Putative uncharacterized protein. (136 aa)    
Predicted Functional Partners:
AFZ07305.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; InterPro IPR005537:IPR013490; KEGG: naz:Aazo_2386 Csx10 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP Csx10.
       0.786
AFZ07307.1
CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; InterPro IPR013407; KEGG: naz:Aazo_2384 Crm2 family CRISPR-associated protein; SPTR: CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Crm2.
       0.782
AFZ07306.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: naz:Aazo_2385 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
       0.778
AFZ07302.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013411; KEGG: naz:Aazo_2390 SSO1426 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP TM1809.
       0.686
AFZ07303.1
PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family; InterPro IPR013442; KEGG: cyc:PCC7424_5837 CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein APE2256.
       0.686
AFZ07301.1
KEGG: cyc:PCC7424_1907 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.610
AFZ07297.1
KEGG: cya:CYA_0873 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.559
AFZ07299.1
KEGG: naz:Aazo_2393 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.544
AFZ07296.1
Helix-turn-helix domain protein; PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: cak:Caul_4638 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein.
       0.542
AFZ07298.1
Hypothetical protein; PFAM: RAMP superfamily; KEGG: naz:Aazo_2394 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.542
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.