STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07305.1PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Csx10 family; InterPro IPR005537:IPR013490; KEGG: naz:Aazo_2386 Csx10 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP Csx10. (415 aa)    
Predicted Functional Partners:
AFZ07306.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: naz:Aazo_2385 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
 
     0.949
AFZ07307.1
CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; InterPro IPR013407; KEGG: naz:Aazo_2384 Crm2 family CRISPR-associated protein; SPTR: CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Crm2.
 
     0.948
AFZ07302.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013411; KEGG: naz:Aazo_2390 SSO1426 family CRISPR-associated RAMP protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated RAMP TM1809.
 
     0.927
AFZ07298.1
Hypothetical protein; PFAM: RAMP superfamily; KEGG: naz:Aazo_2394 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.894
AFZ07300.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: naz:Aazo_2392 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
 
     0.894
AFZ07304.1
KEGG: ana:all1476 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.786
AFZ07301.1
KEGG: cyc:PCC7424_1907 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.742
AFZ07303.1
PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family; InterPro IPR013442; KEGG: cyc:PCC7424_5837 CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein APE2256.
 
     0.738
AFZ04689.1
CRISPR-associated protein Cas6; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6; COGs: COG5551 conserved hypothetical protein; InterPro IPR010156:IPR019267:IPR013249; KEGG: ana:alr1482 hypothetical protein; PFAM: Protein of unknown function DUF2276; RNA polymerase sigma factor 70, region 4 type 2; SPTR: CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein, Cas6.
 
     0.732
AFZ04982.1
AAA ATPase; InterPro IPR003593; KEGG: mar:MAE_19050 hypothetical protein; SMART: ATPase, AAA+ type, core; SPTR: Similar to tr|A0ZAS8|A0ZAS8_NODSP Hypothetical protein.
  
     0.677
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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