STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07312.1PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ter:Tery_4630 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase. (313 aa)    
Predicted Functional Partners:
AFZ07205.1
PFAM: Protein of unknown function (DUF2854); KEGG: ter:Tery_3542 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.692
AFZ05741.1
KEGG: ter:Tery_4446 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.665
AFZ07327.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: naz:Aazo_2746 hypothetical protein; PFAM: Uncharacterised protein family Ycf49; SPTR: Putative uncharacterized protein.
  
     0.639
AFZ05563.1
PFAM: NnrU protein; COGs: COG4094 membrane protein; InterPro IPR009915; KEGG: ter:Tery_2010 NnrU; SPTR: NnrU.
  
     0.628
AFZ07334.1
PFAM: Protein of unknown function (DUF3593); KEGG: ter:Tery_1757 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.626
AFZ05070.1
KEGG: npu:Npun_F5248 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.620
AFZ10074.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR014102:IPR002937; KEGG: naz:Aazo_2875 phytoene desaturase; PFAM: Amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Zeta-carotene desaturase / three-step phytoene desaturase; TIGRFAM: Phytoene desaturase.
  
     0.617
AFZ05991.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.612
AFZ09127.1
PFAM: Protein of unknown function (DUF1092); InterPro IPR009472; KEGG: ter:Tery_4728 hypothetical protein; PFAM: Protein of unknown function DUF1092; SPTR: Putative uncharacterized protein.
  
     0.587
AFZ09122.1
Amine oxidase; PFAM: Flavin containing amine oxidoreductase; COGs: COG3349 conserved hypothetical protein; InterPro IPR002937; KEGG: npu:Npun_R3653 amine oxidase; PFAM: Amine oxidase; SPTR: Amine oxidase.
  
     0.583
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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