STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ07399.1Heat shock protein DnaJ domain protein; PFAM: Protein of unknown function (DUF3353); InterPro IPR001623; KEGG: ana:all3259 hypothetical protein; PFAM: Heat shock protein DnaJ, N-terminal; SPTR: Putative uncharacterized protein. (203 aa)    
Predicted Functional Partners:
AFZ06351.1
PFAM: Protein of unknown function (DUF2930); KEGG: ava:Ava_1879 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ06460.1
PFAM: Protein of unknown function (DUF3067); KEGG: cyt:cce_3900 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.772
AFZ06908.1
KEGG: ana:alr4514 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ06067.1
Protein of unknown function CP12; PFAM: CP12 domain; InterPro IPR003823; KEGG: ava:Ava_1050 hypothetical protein; PFAM: Domain of unknown function CP12; SPTR: Putative uncharacterized protein.
  
     0.770
AFZ08663.1
PFAM: Glutaredoxin-like domain (DUF836); InterPro IPR008554; KEGG: npu:Npun_R2487 glutaredoxin 2; PFAM: Glutaredoxin-like; SPTR: Glutaredoxin 2.
  
     0.769
AFZ10012.1
PFAM: RbcX protein; InterPro IPR003435; KEGG: npu:Npun_F4196 chaperonin family protein RbcX; PFAM: Chaperonin-like RbcX; SPTR: RbcX.
  
     0.768
AFZ09964.1
KEGG: npu:Npun_R6375 high light inducible protein; SPTR: Putative uncharacterized protein.
  
     0.767
AFZ04822.1
KEGG: npu:Npun_R6287 TPR repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFZ04726.1
KEGG: npu:Npun_F1013 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.765
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.